Faculty
Jonathan Katz
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Holmium laser enucleation of the prostate for a case of transition zone prostate cancer Can J Urol. 2024 Apr; 31(2):11861-11863. . View in PubMed
Integration of Patient-Derived Organoids and Organ-on-Chip Systems: Investigating Colorectal Cancer Invasion within the Mechanical and GABAergic Tumor Microenvironment bioRxiv. 2023 Sep 17. . View in PubMed
Synthesis and anti-cancer potential of potent peripheral MAOA inhibitors designed to limit blood:brain penetration Bioorg Med Chem. 2023 09 07; 92:117425. . View in PubMed
Human colorectal cancer-on-chip model to study the microenvironmental influence on early metastatic spread iScience. 2021 May 21; 24(5):102509. . View in PubMed
Deploying Mass Spectrometric Data Analysis in the Amazon AWS Cloud Computing Environment Methods Mol Biol. 2021; 2271:375-397. . View in PubMed
ARID1A prevents squamous cell carcinoma initiation and chemoresistance by antagonizing pRb/E2F1/c-Myc-mediated cancer stemness Cell Death Differ. 2020 06; 27(6):1981-1997. . View in PubMed
Pharmacokinetic properties of the temozolomide perillyl alcohol conjugate (NEO212) in mice Neurooncol Adv. 2020 Jan-Dec; 2(1):vdaa160. . View in PubMed
Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis Oncogene. 2019 04; 38(16):3003-3018. . View in PubMed
Identification, characterization and application of a new peptide against anterior gradient homolog 2 (AGR2) Oncotarget. 2018 Jun 08; 9(44):27363-27379. . View in PubMed
JUN-Mediated Downregulation of EGFR Signaling Is Associated with Resistance to Gefitinib in EGFR-mutant NSCLC Cell Lines Mol Cancer Ther. 2017 08; 16(8):1645-1657. . View in PubMed
Virtualization of Legacy Instrumentation Control Computers for Improved Reliability, Operational Life, and Management Methods Mol Biol. 2017; 1550:309-324. . View in PubMed
Krüppel-like factors in cancer Nat Rev Cancer. 2013 Oct; 13(10):701-13. . View in PubMed
A physical sciences network characterization of non-tumorigenic and metastatic cells Sci Rep. 2013; 3:1449. . View in PubMed
A cross-platform toolkit for mass spectrometry and proteomics Nat Biotechnol. 2012 Oct; 30(10):918-20. . View in PubMed
Quantitative proteomic profiling identifies protein correlates to EGFR kinase inhibition Mol Cancer Ther. 2012 May; 11(5):1071-81. . View in PubMed
A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlasMol Cell Proteomics. 2011 Sep; 10(9):M110. 006353. . View in PubMed
Model-based discovery of circulating biomarkers Methods Mol Biol. 2011; 728:87-107. . View in PubMed
Peptide identification from mixture tandem mass spectra Mol Cell Proteomics. 2010 Jul; 9(7):1476-85. . View in PubMed
Precursor-ion mass re-estimation improves peptide identification on hybrid instruments J Proteome Res. 2008 Sep; 7(9):4031-9. . View in PubMed
The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools J Proteome Res. 2008 Jan; 7(1):96-103. . View in PubMed
Clinical proteomics: the promises and challenges of mass spectrometry-based biomarker discovery Clin Adv Hematol Oncol. 2006 Jul; 4(7):541-9. . View in PubMed
Yeast Hsl7 (histone synthetic lethal 7) catalyses the in vitro formation of omega-N(G)-monomethylarginine in calf thymus histone H2A Biochem J. 2006 May 01; 395(3):563-70. . View in PubMed
A perspective on protein profiling of blood BJU Int. 2005 Sep; 96(4):477-82. . View in PubMed
Subtle modification of isotope ratio proteomics; an integrated strategy for expression proteomics Phytochemistry. 2004 Jun; 65(11):1507-15. . View in PubMed
3-Isopropylmalate is the major endogenous substrate of the Saccharomyces cerevisiae trans-aconitate methyltransferase Biochemistry. 2004 May 25; 43(20):5976-86. . View in PubMed
A new technique (COMSPARI) to facilitate the identification of minor compounds in complex mixtures by GC/MS and LC/MS: tools for the visualization of matched datasets J Am Soc Mass Spectrom. 2004 Apr; 15(4):580-4. . View in PubMed
Automated identification of putative methyltransferases from genomic open reading frames Mol Cell Proteomics. 2003 Aug; 2(8):525-40. . View in PubMed
Structure and function of an archaeal homolog of survival protein E (SurEalpha): an acid phosphatase with purine nucleotide specificity J Mol Biol. 2003 Mar 07; 326(5):1559-75. . View in PubMed
Dr. Katz's research interests include mass spectrometry, proteomics and elucidation of novel clinical prognostic markers.